The main documentation for Feature-Based Molecular Networking can be accessed here. See our article. Below we describe how to use MZmine2 v2.51 with the FBMN workflow on GNPS. We have previously written the documentation for v2.33 and have noted differenc

Feature-Based Molecular Networking (FBMN) is a computational method that bridges popular mass spectrometry data processing tools for LC-MS/MS and molecular networking analysis on GNPS. The supported tools are: MZmine , OpenMS , MS-DIAL , MetaboScape , XCM

Feature-Based Molecular Networking (FBMN) with MZmine2 - Microbiome Molecules in Fecal Samples in American Gut Project. In this tutorial you will be guided into running MZmine2 for the Feature Based Molecular Network (FBMN)) workflow on GNPS to reproduce