Perseus network analysis tutorial/Jan Rudolph

All course materials can be found online:
drive.google.com/drive/folders/11jVCEej9cSN9bzI…

Information about the tutorial:
3 new workflows in Perseus:

1. Hawaii (multi-volcano) plot:
Analyze your pull-down screens in one go. The Hawaii plots offers the same interactivity as the regular volcano plot while providing global control over parameters and making it easier to compare different conditions. Visualize the resulting interaction network directly within Perseus.

2. Phosphoproteomics + PPI:
Analyze your PTM data in the context of a PPI network such as STRING. Derive signaling functionality scores that allow you to identify which proteins significantly drive/suppress phosphorylation in your sample.

3.Co-expression analysis + phenotype/clinical:
Cluster your data based on a co-expression network. Understand which clusters drive your phenotype by correlating it with proteins representative for each cluster.

MaxQuant Summer school 2018 in Barcelona:

website: summerschool.maxquant.de/summerschool2018/welco…
program: summerschool.maxquant.de/summerschool2018/progr…

All the MaxQuant Summer School presentations are going to be live streamed.